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PPARD peroxisome proliferator activated receptor delta [ Pan troglodytes (chimpanzee) ]

Gene ID: 463188, updated on 21-May-2019

Summary

Official Symbol
PPARDprovided by VGNC
Official Full Name
peroxisome proliferator activated receptor deltaprovided by VGNC
Primary source
VGNC:VGNC:7904
Locus tag
CK820_G0007055
See related
Ensembl:ENSPTRG00000018082
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See PPARD in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 6 NC_036885.1 (34843480..34927246)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 6 NC_006473.4 (35677008..35760795)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 6 NC_006473.3 (35785157..35871512)

Chromosome 6 - NC_036885.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 76 Neighboring gene DEF6 guanine nucleotide exchange factor Neighboring gene probable E3 ubiquitin-protein ligase makorin-1 Neighboring gene FA complementation group E

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Acute myeloid leukemia, organism-specific biosystem (from KEGG)
    Acute myeloid leukemia, organism-specific biosystemAcute myeloid leukemia (AML) is a disease that is characterized by uncontrolled proliferation of clonal neoplastic cells and accumulation in the bone marrow of blasts with an impaired differentiation...
  • Acute myeloid leukemia, conserved biosystem (from KEGG)
    Acute myeloid leukemia, conserved biosystemAcute myeloid leukemia (AML) is a disease that is characterized by uncontrolled proliferation of clonal neoplastic cells and accumulation in the bone marrow of blasts with an impaired differentiation...
  • Adipogenesis, organism-specific biosystem (from WikiPathways)
    Adipogenesis, organism-specific biosystemThe different classess of factors involved in adipogenesis are shown. Adipogenesis is the process by which fat cells differentiate from predadipocytes to adipocytes (fat cells). Adipose tissue, compo...
  • Nuclear Receptors, organism-specific biosystem (from WikiPathways)
    Nuclear Receptors, organism-specific biosystemNuclear receptors are a class of proteins found within the interior of cells that are responsible for sensing the presence of steroid and thyroid hormones and certain other molecules. In response, th...
  • Nuclear receptors in lipid metabolism and toxicity, organism-specific biosystem (from WikiPathways)
    Nuclear receptors in lipid metabolism and toxicity, organism-specific biosystemNuclear receptors are transcription factors that are activated upon binding to its ligands. Initially, they had been classified as classic endocrine nuclear hormone receptors and orphan receptors. Ho...
  • PPAR signaling pathway, organism-specific biosystem (from KEGG)
    PPAR signaling pathway, organism-specific biosystemPeroxisome proliferator-activated receptors (PPARs) are nuclear hormone receptors that are activated by fatty acids and their derivatives. PPAR has three subtypes (PPARalpha, beta/delta, and gamma) s...
  • PPAR signaling pathway, conserved biosystem (from KEGG)
    PPAR signaling pathway, conserved biosystemPeroxisome proliferator-activated receptors (PPARs) are nuclear hormone receptors that are activated by fatty acids and their derivatives. PPAR has three subtypes (PPARalpha, beta/delta, and gamma) s...
  • Pathways in cancer, organism-specific biosystem (from KEGG)
    Pathways in cancer, organism-specific biosystem
    Pathways in cancer
  • Wnt signaling pathway, organism-specific biosystem (from KEGG)
    Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
  • Wnt signaling pathway, conserved biosystem (from KEGG)
    Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

General gene information

Markers

Homology

General protein information

Preferred Names
peroxisome proliferator-activated receptor delta

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036885.1 Reference Clint_PTRv2 Primary Assembly

    Range
    34843480..34927246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016955310.2XP_016810799.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  2. XM_016955309.2XP_016810798.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  3. XM_518905.5XP_518905.2  peroxisome proliferator-activated receptor delta isoform X2

    See identical proteins and their annotated locations for XP_518905.2

    UniProtKB/TrEMBL
    H2R2N3
    Related
    ENSPTRP00000044222.3
    Conserved Domains (2) summary
    cd06932
    Location:173440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
  4. XM_016955308.2XP_016810797.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  5. XM_003311240.4XP_003311288.1  peroxisome proliferator-activated receptor delta isoform X6

    See identical proteins and their annotated locations for XP_003311288.1

    UniProtKB/TrEMBL
    K7CUN0
    Related
    ENSPTRP00000083985.1
    Conserved Domains (1) summary
    cd06932
    Location:75342
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
  6. XM_016955311.2XP_016810800.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  7. XM_016955306.2XP_016810795.1  peroxisome proliferator-activated receptor delta isoform X2

    UniProtKB/TrEMBL
    H2R2N3
    Related
    ENSPTRP00000089167.1
    Conserved Domains (2) summary
    cd06932
    Location:173440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
  8. XM_009451110.3XP_009449385.1  peroxisome proliferator-activated receptor delta isoform X2

    See identical proteins and their annotated locations for XP_009449385.1

    UniProtKB/TrEMBL
    H2R2N3
    Conserved Domains (2) summary
    cd06932
    Location:173440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
  9. XM_016955305.2XP_016810794.1  peroxisome proliferator-activated receptor delta isoform X2

    UniProtKB/TrEMBL
    H2R2N3
    Conserved Domains (2) summary
    cd06932
    Location:173440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
  10. XM_016955307.2XP_016810796.1  peroxisome proliferator-activated receptor delta isoform X2

    UniProtKB/TrEMBL
    H2R2N3
    Related
    ENSPTRP00000083375.1
    Conserved Domains (2) summary
    cd06932
    Location:173440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
  11. XM_016955313.2XP_016810802.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  12. XM_016955312.2XP_016810801.1  peroxisome proliferator-activated receptor delta isoform X3

    Conserved Domains (2) summary
    cd06932
    Location:135402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
  13. XM_016955314.2XP_016810803.1  peroxisome proliferator-activated receptor delta isoform X4

  14. XM_016955315.2XP_016810804.1  peroxisome proliferator-activated receptor delta isoform X5

  15. XM_016955304.2XP_016810793.1  peroxisome proliferator-activated receptor delta isoform X1

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