HTR1B 5-hydroxytryptamine receptor 1B [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: HTR1Bprovided by VGNC
Official Full Name: 5-hydroxytryptamine receptor 1Bprovided by VGNC
Primary source: VGNC:VGNC:7894
Locus tag: CK820_G0000921
See related: Ensembl:ENSPTRG00000018361
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	5	NC_072403.2 (89435738..89436910, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	6	NC_072404.1 (89434222..89435394, complement)

Chromosome 5 - NC_072403.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

HTR1B_992 (e-PCR)
- UniSTS:277337

HTR1B_V264 (e-PCR)
- UniSTS:277337

GDB:580593 (e-PCR)
- UniSTS:157835

GDB:580596 (e-PCR)
- UniSTS:157836

GDB:580599 (e-PCR)
- UniSTS:157837

GDB:580603 (e-PCR)
- UniSTS:157838

GDB:580608 (e-PCR)
- UniSTS:157839

GDB:580611 (e-PCR)
- UniSTS:157840

RH47746 (e-PCR)
- UniSTS:53392

GDB:580614 (e-PCR)
- UniSTS:157841

GDB:580618 (e-PCR)
- UniSTS:157842

GDB:580621 (e-PCR)
- UniSTS:157843

NoName (e-PCR)
- UniSTS:481202

PMC311033P3 (e-PCR)
- UniSTS:272841

GDB:603580 (e-PCR)
- UniSTS:158176

GDB:603584 (e-PCR)
- UniSTS:158177

GDB:603594 (e-PCR)
- UniSTS:158178

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables G protein-coupled serotonin receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables dopamine neurotransmitter receptor activity, coupled via Gs	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in bone remodeling	IEA Inferred from Electronic Annotation more info	PubMed
involved_in chemical synaptic transmission	IEA Inferred from Electronic Annotation more info	PubMed
involved_in dopamine receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of behavior	IEA Inferred from Electronic Annotation more info	PubMed
involved_in vasoconstriction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: 5-hydroxytryptamine receptor 1B

Names: 5-HT-1B; 5-HT1B; 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled; serotonin receptor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001009102.1 → NP_001009102.1 5-hydroxytryptamine receptor 1B

See identical proteins and their annotated locations for NP_001009102.1

Status: PROVISIONAL

Source sequence(s)

AB041371

UniProtKB/Swiss-Prot

P60020

UniProtKB/TrEMBL

A0A2J8PVS1

Related

ENSPTRP00000031384.1, ENSPTRT00000033962.2

Conserved Domains (1) summary

cd15333
Location:46 → 380

7tmA_5-HT1B_1D; serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

89435738..89436910 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)