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HTR1B 5-hydroxytryptamine receptor 1B [ Pan troglodytes (chimpanzee) ]

Gene ID: 462833, updated on 6-Oct-2018

Summary

Official Symbol
HTR1Bprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Bprovided by VGNC
Primary source
VGNC:VGNC:7894
Locus tag
CK820_G0000921
See related
Ensembl:ENSPTRG00000018361
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See HTR1B in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 6 NC_036885.1 (74912831..74914003, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 6 NC_006473.3 (77884341..77885513, complement)

Chromosome 6 - NC_036885.1Genomic Context describing neighboring genes Neighboring gene 52 kDa repressor of the inhibitor of the protein kinase pseudogene Neighboring gene uncharacterized LOC104006891 Neighboring gene meiotic double-stranded break formation protein 4 Neighboring gene uncharacterized LOC104006892

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Neuroactive ligand-receptor interaction, organism-specific biosystem (from KEGG)
    Neuroactive ligand-receptor interaction, organism-specific biosystem
    Neuroactive ligand-receptor interaction
  • Neuroactive ligand-receptor interaction, conserved biosystem (from KEGG)
    Neuroactive ligand-receptor interaction, conserved biosystem
    Neuroactive ligand-receptor interaction
  • Serotonergic synapse, organism-specific biosystem (from KEGG)
    Serotonergic synapse, organism-specific biosystemSerotonin (5-Hydroxytryptamine, 5-HT) is a monoamine neurotransmitter that plays important roles in physiological functions such as learning and memory, emotion, sleep, pain, motor function and endoc...
  • Taste transduction, organism-specific biosystem (from KEGG)
    Taste transduction, organism-specific biosystemFive basic tastes are recognized by humans and most other animals - bitter, sweet, sour, salty and umami. In vertebrates, taste stimuli are detected by taste receptor cells (TRCs). At least three dis...
  • Taste transduction, conserved biosystem (from KEGG)
    Taste transduction, conserved biosystemFive basic tastes are recognized by humans and most other animals - bitter, sweet, sour, salty and umami. In vertebrates, taste stimuli are detected by taste receptor cells (TRCs). At least three dis...
  • cAMP signaling pathway, organism-specific biosystem (from KEGG)
    cAMP signaling pathway, organism-specific biosystemcAMP is one of the most common and universal second messengers, and its formation is promoted by adenylyl cyclase (AC) activation after ligation of G protein-coupled receptors (GPCRs) by ligands incl...
  • cAMP signaling pathway, conserved biosystem (from KEGG)
    cAMP signaling pathway, conserved biosystemcAMP is one of the most common and universal second messengers, and its formation is promoted by adenylyl cyclase (AC) activation after ligation of G protein-coupled receptors (GPCRs) by ligands incl...

General gene information

Markers

Homology

General protein information

Preferred Names
5-hydroxytryptamine receptor 1B
Names
5-HT-1B
5-HT1B
5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled
serotonin receptor 1B

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009102.1NP_001009102.1  5-hydroxytryptamine receptor 1B

    See identical proteins and their annotated locations for NP_001009102.1

    Status: PROVISIONAL

    Source sequence(s)
    AB041371
    UniProtKB/Swiss-Prot
    P60020
    Related
    ENSPTRP00000031384.1, ENSPTRT00000033962.2
    Conserved Domains (1) summary
    cd15333
    Location:46380
    7tmA_5-HT1B_1D; serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036885.1 Reference Clint_PTRv2 Primary Assembly

    Range
    74912831..74914003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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