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LMNB1 lamin B1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462035, updated on 27-Jun-2020

Summary

Official Symbol
LMNB1provided by VGNC
Official Full Name
lamin B1provided by VGNC
Primary source
VGNC:VGNC:4071
Locus tag
CK820_G0026854
See related
Ensembl:ENSPTRG00000017188 Ensembl:ENSPTRG00000046590
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
lamin-B1
Orthologs

Genomic context

See LMNB1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (104989579..105050112)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 5 Unlocalized Scaffold NW_015973207.1 (12958..73557, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (127400394..127460919)

Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene 10 kDa heat shock protein, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107974842 Neighboring gene U6 spliceosomal RNA Neighboring gene membrane associated ring-CH-type finger 3 Neighboring gene translation initiation factor IF-2-like Neighboring gene chromosome 5 C5orf63 homolog

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280441.1NP_001267370.1  lamin-B1

    See identical proteins and their annotated locations for NP_001267370.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306586
    UniProtKB/TrEMBL
    G2HIM2
    Related
    ENSPTRP00000084139.1, ENSPTRT00000094732.1
    Conserved Domains (3) summary
    pfam00038
    Location:31387
    Filament; Intermediate filament protein
    pfam00932
    Location:439543
    LTD; Lamin Tail Domain
    cl12013
    Location:155222
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

    Range
    104989579..105050112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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