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CTNND2 catenin delta 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461724, updated on 8-Nov-2017
Official Symbol
CTNND2provided by VGNC
Official Full Name
catenin delta 2provided by VGNC
Primary source
VGNC:VGNC:3959
See related
Ensembl:ENSPTRG00000016731
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
Location:
chromosome: 5
Exon count:
25
Annotation release Status Assembly Chr Location
104 current Pan_tro 3.0 (GCF_000001515.7) 5 NC_006472.4 (11238939..12178360, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (11092822..12038876, complement)

Chromosome 5 - NC_006472.4Genomic Context describing neighboring genes Neighboring gene intersectin-1 pseudogene Neighboring gene death associated protein Neighboring gene uncharacterized LOC107974627 Neighboring gene uncharacterized LOC107974629

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Preferred Names
catenin delta-2
Names
catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pan_tro 3.0 Primary Assembly

Genomic

  1. NC_006472.4 Reference Pan_tro 3.0 Primary Assembly

    Range
    11238939..12178360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001147603.4XP_001147603.2  catenin delta-2 isoform X3

    Conserved Domains (4) summary
    smart00185
    Location:9741018
    ARM; Armadillo/beta-catenin-like repeats
    cd00020
    Location:544666
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam17052
    Location:10291088
    CAF20; Cap associated factor
    sd00043
    Location:552577
    ARM; armadillo repeat [structural motif]
  2. XM_016952954.1XP_016808443.1  catenin delta-2 isoform X4

  3. XM_009448799.2XP_009447074.2  catenin delta-2 isoform X1

    Conserved Domains (4) summary
    cd00020
    Location:544666
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam00514
    Location:834875
    Arm; Armadillo/beta-catenin-like repeat
    pfam17052
    Location:10541113
    CAF20; Cap associated factor
    sd00043
    Location:552577
    ARM; armadillo repeat [structural motif]
  4. XM_009448800.2XP_009447075.2  catenin delta-2 isoform X2

    Conserved Domains (4) summary
    cd00020
    Location:530652
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam00514
    Location:820861
    Arm; Armadillo/beta-catenin-like repeat
    pfam17052
    Location:10401099
    CAF20; Cap associated factor
    sd00043
    Location:538563
    ARM; armadillo repeat [structural motif]
  5. XM_009448804.2XP_009447079.2  catenin delta-2 isoform X6

    Conserved Domains (4) summary
    smart00185
    Location:883927
    ARM; Armadillo/beta-catenin-like repeats
    cd00020
    Location:453575
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam17052
    Location:938997
    CAF20; Cap associated factor
    sd00043
    Location:461486
    ARM; armadillo repeat [structural motif]
  6. XM_009448802.2XP_009447077.2  catenin delta-2 isoform X5

    Conserved Domains (4) summary
    cd00020
    Location:453575
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam00514
    Location:743784
    Arm; Armadillo/beta-catenin-like repeat
    pfam17052
    Location:9631022
    CAF20; Cap associated factor
    sd00043
    Location:461486
    ARM; armadillo repeat [structural motif]
  7. XM_009448801.2XP_009447076.2  catenin delta-2 isoform X5

    Conserved Domains (4) summary
    cd00020
    Location:453575
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam00514
    Location:743784
    Arm; Armadillo/beta-catenin-like repeat
    pfam17052
    Location:9631022
    CAF20; Cap associated factor
    sd00043
    Location:461486
    ARM; armadillo repeat [structural motif]
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