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GPX1 glutathione peroxidase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461015, updated on 5-Oct-2018

Summary

Official Symbol
GPX1provided by VGNC
Official Full Name
glutathione peroxidase 1provided by VGNC
Primary source
VGNC:VGNC:53366
Locus tag
CK820_G0005106
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See GPX1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 3 NC_036882.1 (49617055..49617941, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 3 NC_006490.3 (50130307..50131193, complement)

Chromosome 3 - NC_036882.1Genomic Context describing neighboring genes Neighboring gene chromosome 3 C3orf62 homolog Neighboring gene ubiquitin specific peptidase 4 Neighboring gene ras homolog family member A Neighboring gene T cell leukemia translocation altered

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

General protein information

Preferred Names
glutathione peroxidase 1
Names
GPx-1
GSHPx-1
cellular glutathione peroxidase
NP_001070980.2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077512.2NP_001070980.2  glutathione peroxidase 1

    See identical proteins and their annotated locations for NP_001070980.2

    Status: VALIDATED

    Source sequence(s)
    AB120996, CB297959, NBAG03000218
    UniProtKB/Swiss-Prot
    Q0EFA0
    Conserved Domains (1) summary
    cd00340
    Location:13190
    GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036882.1 Reference Clint_PTRv2 Primary Assembly

    Range
    49617055..49617941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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