BDH1 3-hydroxybutyrate dehydrogenase 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: BDH1provided by VGNC
Official Full Name: 3-hydroxybutyrate dehydrogenase 1provided by VGNC
Primary source: VGNC:VGNC:53359
Locus tag: CK820_G0045919
See related: Ensembl:ENSPTRG00000015794
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2023_04	current	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	3	NC_072401.1 (200589990..200653240, complement)

Chromosome 3 - NC_072401.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_072401.1 Chromosome 3 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

D11S2921 (e-PCR)
- UniSTS:152074

D8S2279 (e-PCR)
- UniSTS:473907

D3S4168 (e-PCR)
- UniSTS:53836

D10S16 (e-PCR)
- UniSTS:155756

D1S1423 (e-PCR)
- UniSTS:149619

D16S325 (e-PCR)
- UniSTS:147089

Homology

Homologs of the BDH1 gene: The BDH1 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, M.oryzae, and frog.
Orthologs from Annotation Pipeline: 332 organisms have orthologs with human gene BDH1
Orthologs

General protein information

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Preferred Names: D-beta-hydroxybutyrate dehydrogenase, mitochondrial

Names: 3-hydroxybutyrate dehydrogenase, type 1

XP_009445404.2

EC 1.1.1.30

XP_016798059.1

EC 1.1.1.30

XP_016798060.1

EC 1.1.1.30

XP_016798062.1

EC 1.1.1.30

XP_054538474.1

EC 1.1.1.30

XP_054538475.1

EC 1.1.1.30

XP_516981.2

EC 1.1.1.30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

NC_072401.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Range

200589990..200653240 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016942570.3 → XP_016798059.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A2I3SEC6, A0A2R9AZ51, A0A6D2XMT9

Conserved Domains (1) summary

cd09805
Location:56 → 341

type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
XM_016942573.3 → XP_016798062.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A2I3SEC6, A0A2R9AZ51, A0A6D2XMT9

Conserved Domains (1) summary

cd09805
Location:56 → 341

type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
XM_016942571.3 → XP_016798060.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A2I3SEC6, A0A2R9AZ51, A0A6D2XMT9

Conserved Domains (1) summary

cd09805
Location:56 → 341

type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
XM_054682499.1 → XP_054538474.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A2I3SEC6, A0A2R9AZ51, A0A6D2XMT9
XM_009447129.4 → XP_009445404.2 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X2

Conserved Domains (2) summary

cd09805
Location:43 → 328

type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

pfam00106
Location:43 → 228

adh_short; short chain dehydrogenase
XM_516981.8 → XP_516981.2 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X3

Conserved Domains (2) summary

cd09805
Location:37 → 322

type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

pfam00106
Location:37 → 222

adh_short; short chain dehydrogenase
XM_054682500.1 → XP_054538475.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial isoform X2