U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GYG1 glycogenin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460765, updated on 29-Mar-2024

Summary

Official Symbol
GYG1provided by VGNC
Official Full Name
glycogenin 1provided by VGNC
Primary source
VGNC:VGNC:1834
Locus tag
CK820_G0006400
See related
Ensembl:ENSPTRG00000015509
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GYG1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (152188673..152225021)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (152098060..152134391)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A3 Neighboring gene ubiquilin-4-like Neighboring gene helicase like transcription factor Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene ceruloplasmin

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glycogenin-1
XP_003310161.2
XP_003310162.2
XP_516810.4

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    152188673..152225021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_516810.7XP_516810.4  glycogenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3SYS9, A0A2J8P2V5, A0A6D2VVY6, K7AGZ2
    Related
    ENSPTRP00000072825.1
    Conserved Domains (1) summary
    cd02537
    Location:4254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
  2. XM_003310114.5XP_003310162.2  glycogenin-1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8P2U2, A0A6D2Y3V6, K7BSW1
    Related
    ENSPTRP00000070941.1
    Conserved Domains (1) summary
    cd02537
    Location:4201
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
  3. XM_003310113.4XP_003310161.2  glycogenin-1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3SYS9, A0A2J8P2W5, A0A6D2VS91, H2QNJ7
    Related
    ENSPTRP00000026705.5
    Conserved Domains (1) summary
    cd02537
    Location:4254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen