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GATA2 GATA binding protein 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460672, updated on 2-Nov-2023

Summary

Official Symbol
GATA2provided by VGNC
Official Full Name
GATA binding protein 2provided by VGNC
Primary source
VGNC:VGNC:1824
Locus tag
CK820_G0040064
See related
Ensembl:ENSPTRG00000015355
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See GATA2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (131624534..131638326, complement)

Chromosome 3 - NC_072401.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104005737 Neighboring gene DnaJ heat shock protein family (Hsp40) member B8 Neighboring gene uncharacterized LOC101058734 Neighboring gene uncharacterized LOC737366 Neighboring gene ribophorin I

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072401.1 Chromosome 3 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General protein information

Preferred Names
endothelial transcription factor GATA-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072401.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    131624534..131638326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016941859.3XP_016797348.1  endothelial transcription factor GATA-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KAK0, A0A6D2XUV7, H2RAN3
    Related
    ENSPTRP00000054198.2
    Conserved Domains (1) summary
    cd00202
    Location:349398
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  2. XM_009446409.4XP_009444684.1  endothelial transcription factor GATA-2 isoform X2

    Conserved Domains (2) summary
    smart00401
    Location:342391
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
    cd00202
    Location:347396
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
  3. XM_516728.8XP_516728.2  endothelial transcription factor GATA-2 isoform X1

    See identical proteins and their annotated locations for XP_516728.2

    UniProtKB/TrEMBL
    A0A2J8KAK0, A0A6D2XUV7, H2RAN3
    Conserved Domains (1) summary
    cd00202
    Location:349398
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C