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DAG1 dystroglycan 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460372, updated on 27-Jun-2020

Summary

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Official Symbol
DAG1provided by VGNC
Official Full Name
dystroglycan 1provided by VGNC
Primary source
VGNC:VGNC:6148
Locus tag
CK820_G0005098
See related
Ensembl:ENSPTRG00000014926
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DAG1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 3 NC_036882.1 (49730655..49799193)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 3 NC_006490.4 (50539618..50608155)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 3 NC_006490.3 (50248137..50317324)

Chromosome 3 - NC_036882.1Genomic Context describing neighboring genes Neighboring gene nicolin 1 Neighboring gene aminomethyltransferase Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene acylaminoacyl-peptide hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
dystroglycan
Names
dystroglycan 1 (dystrophin-associated glycoprotein 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036882.1 Reference Clint_PTRv2 Primary Assembly

    Range
    49730655..49799193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016941097.2 → XP_016796586.1  dystroglycan

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  2. XM_009445497.3 → XP_009443772.1  dystroglycan

    See identical proteins and their annotated locations for XP_009443772.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  3. XM_003339043.4 → XP_003339091.1  dystroglycan

    See identical proteins and their annotated locations for XP_003339091.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  4. XM_001164796.5 → XP_001164796.1  dystroglycan

    See identical proteins and their annotated locations for XP_001164796.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  5. XM_001164638.5 → XP_001164638.1  dystroglycan

    See identical proteins and their annotated locations for XP_001164638.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  6. XM_001164754.5 → XP_001164754.1  dystroglycan

    See identical proteins and their annotated locations for XP_001164754.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  7. XM_009445499.3 → XP_009443774.1  dystroglycan

    See identical proteins and their annotated locations for XP_009443774.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  8. XM_009445500.3 → XP_009443775.1  dystroglycan

    See identical proteins and their annotated locations for XP_009443775.1

    UniProtKB/TrEMBL
    H2QML8
    Related
    ENSPTRP00000025763.4
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  9. XM_009445498.3 → XP_009443773.1  dystroglycan

    See identical proteins and their annotated locations for XP_009443773.1

    UniProtKB/TrEMBL
    H2QML8
    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:182 → 304
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:606 → 895
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:303 → 404
    DNA_pol3_delta2; DNA polymerase III, delta subunit
Nucleotide Protein
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