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NICN1 nicolin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460370, updated on 5-Oct-2018

Summary

Official Symbol
NICN1provided by VGNC
Official Full Name
nicolin 1provided by VGNC
Primary source
VGNC:VGNC:2444
Locus tag
CK820_G0005100
See related
Ensembl:ENSPTRG00000032494
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See NICN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 3 NC_036882.1 (49685172..49691636, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 3 NC_006490.3 (50200026..50206413, complement)

Chromosome 3 - NC_036882.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia translocation altered Neighboring gene aminomethyltransferase Neighboring gene dystroglycan 1 Neighboring gene bassoon presynaptic cytomatrix protein

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036882.1 Reference Clint_PTRv2 Primary Assembly

    Range
    49685172..49691636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009445493.3XP_009443768.2  nicolin-1 isoform X2

    UniProtKB/TrEMBL
    K7C5V2
    Related
    ENSPTRP00000066798.1
  2. XM_009445494.3XP_009443769.2  nicolin-1 isoform X3

  3. XM_009445492.3XP_009443767.2  nicolin-1 isoform X1

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