PPP1CB protein phosphatase 1 catalytic subunit beta [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PPP1CBprovided by VGNC
Official Full Name: protein phosphatase 1 catalytic subunit betaprovided by VGNC
Primary source: VGNC:VGNC:7699
Locus tag: CK820_G0042540
See related: Ensembl:ENSPTRG00000011788
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2A

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	12	NC_072410.2 (94048113..94097508, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	2A	NC_072399.1 (28753445..28805740)

Chromosome 12 - NC_072410.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

D2S392 (e-PCR), detects polymorphism
- UniSTS:69379

Ppp1cb (e-PCR), detects polymorphism
- UniSTS:526868

D2S392 (e-PCR), detects polymorphism
- UniSTS:66857

Ppp1cb (e-PCR), detects polymorphism
- UniSTS:507434

PPP1CB_3843 (e-PCR)
- UniSTS:462442

STS-W67887 (e-PCR)
- UniSTS:78464

SHGC-33158 (e-PCR)
- UniSTS:67777

EST16D1 (e-PCR)
- UniSTS:263141

D6S1941 (e-PCR)
- UniSTS:20217

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein serine/threonine phosphatase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in circadian regulation of gene expression	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of circadian rhythm	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: serine/threonine-protein phosphatase PP1-beta catalytic subunit

Names: protein phosphatase 1, catalytic subunit, beta isozyme

XP_016803763.1

EC 3.1.3.16

XP_063645271.1

EC 3.1.3.16

XP_063645272.1

EC 3.1.3.16

XP_063645273.1

EC 3.1.3.16

XP_063645274.1

EC 3.1.3.16

XP_063645275.1

EC 3.1.3.16

XP_063645276.1

EC 3.1.3.16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

94048113..94097508 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063789201.1 → XP_063645271.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1

UniProtKB/TrEMBL

A0A2J8K0K5, A0A6D2Y6H3, H2QHP3
XM_016948274.4 → XP_016803763.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1

UniProtKB/TrEMBL

A0A2I3RUP3, A0A2J8K0K5, A0A6D2Y6H3, H2QHP3

Related

ENSPTRP00000020246.5

Conserved Domains (1) summary

cd07414
Location:7 → 297

MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain
XM_063789202.1 → XP_063645272.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2
XM_063789206.1 → XP_063645276.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1

UniProtKB/TrEMBL

A0A2J8K0K5, A0A6D2Y6H3, H2QHP3
XM_063789205.1 → XP_063645275.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1

UniProtKB/TrEMBL

A0A2J8K0K5, A0A6D2Y6H3, H2QHP3
XM_063789204.1 → XP_063645274.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2
XM_063789203.1 → XP_063645273.1 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2