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ARSA arylsulfatase A [ Pan troglodytes (chimpanzee) ]

Gene ID: 458946, updated on 3-Apr-2024

Summary

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Official Symbol
ARSAprovided by VGNC
Official Full Name
arylsulfatase Aprovided by VGNC
Primary source
VGNC:VGNC:12816
Locus tag
CK820_G0049008
See related
Ensembl:ENSPTRG00000014550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (52747864..52751019, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (45778658..45783367, complement)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 2 Neighboring gene uncharacterized LOC134809704 Neighboring gene SH3 and multiple ankyrin repeat domains 3 Neighboring gene uncharacterized LOC134809753 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylsulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arylsulfatase A
NP_001267325.1
XP_009436951.2
XP_016794252.1
XP_063663577.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280396.1 → NP_001267325.1  arylsulfatase A precursor

    See identical proteins and their annotated locations for NP_001267325.1

    Status: PROVISIONAL

    Source sequence(s)
    AK307040
    UniProtKB/TrEMBL
    G2HJX6, K6ZJR3
    Related
    ENSPTRP00000025086.5, ENSPTRT00000027211.5
    Conserved Domains (2) summary
    COG3119
    Location:19 → 441
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    cl23718
    Location:20 → 503
    ALP_like; alkaline phosphatases and sulfatases

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    52747864..52751019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063807507.1 → XP_063663577.1  arylsulfatase A isoform X2

    UniProtKB/TrEMBL
    A0A2J8JBH4

  2. XM_016938763.3 → XP_016794252.1  arylsulfatase A isoform X1

    UniProtKB/TrEMBL
    A0A2J8JBH5, A0A6D2WA71, H2QLY4, K6ZJR3, K7CLG1
    Conserved Domains (1) summary
    cl23718
    Location:22 → 505
    ALP_like; alkaline phosphatases and sulfatases

  3. XM_009438676.4 → XP_009436951.2  arylsulfatase A isoform X1

    UniProtKB/TrEMBL
    A0A2J8JBH5, A0A6D2WA71, H2QLY4, K6ZJR3, K7CLG1
    Conserved Domains (1) summary
    cl23718
    Location:22 → 505
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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