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POLR3C RNA polymerase III subunit C [ Pan troglodytes (chimpanzee) ]

Gene ID: 457224, updated on 5-Oct-2018

Summary

Official Symbol
POLR3Cprovided by VGNC
Official Full Name
RNA polymerase III subunit Cprovided by VGNC
Primary source
VGNC:VGNC:8445
Locus tag
CK820_G0054101
See related
Ensembl:ENSPTRG00000001208
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See POLR3C in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 1 NC_036879.1 (122113492..122132213)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 1 NC_006468.3 (112883205..112902209)

Chromosome 1 - NC_036879.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing 1 Neighboring gene uncharacterized LOC107971198 Neighboring gene CD160 molecule Neighboring gene ring finger protein 115 Neighboring gene nudix hydrolase 17 Neighboring gene protein inhibitor of activated STAT 3 Neighboring gene ankyrin repeat domain 35

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

General protein information

Preferred Names
DNA-directed RNA polymerase III subunit RPC3
Names
polymerase (RNA) III (DNA directed) polypeptide C (62kD)
polymerase (RNA) III subunit C

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036879.1 Reference Clint_PTRv2 Primary Assembly

    Range
    122113492..122132213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001161607.6XP_001161607.1  DNA-directed RNA polymerase III subunit RPC3 isoform X2

    See identical proteins and their annotated locations for XP_001161607.1

    UniProtKB/TrEMBL
    H2PZU3
    Related
    ENSPTRP00000002058.2
    Conserved Domains (2) summary
    pfam05645
    Location:146345
    RNA_pol_Rpc82; RNA polymerase III subunit RPC82
    pfam08221
    Location:765
    HTH_9; RNA polymerase III subunit RPC82 helix-turn-helix domain
  2. XM_513732.7XP_513732.3  DNA-directed RNA polymerase III subunit RPC3 isoform X1

    Conserved Domains (2) summary
    pfam05645
    Location:157356
    RNA_pol_Rpc82; RNA polymerase III subunit RPC82
    pfam08221
    Location:1876
    HTH_9; RNA polymerase III subunit RPC82 helix-turn-helix domain
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