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RPS8 ribosomal protein S8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456547, updated on 11-Oct-2018

Summary

Official Symbol
RPS8provided by VGNC
Official Full Name
ribosomal protein S8provided by VGNC
Primary source
VGNC:VGNC:57620
Locus tag
CK820_G0025598
See related
Ensembl:ENSPTRG00000000659
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See RPS8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 1 NC_036879.1 (43585195..43588483)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 1 NC_006468.3 (45118695..45121983)

Chromosome 1 - NC_036879.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene kinesin family member 2C Neighboring gene small nucleolar RNA SNORD55/SNORD39 Neighboring gene small nucleolar RNA SNORD46 Neighboring gene small nucleolar RNA SNORD38 Neighboring gene small nucleolar RNA SNORD38 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene bestrophin 4

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036879.1 Reference Clint_PTRv2 Primary Assembly

    Range
    43585195..43588483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_513132.4XP_513132.1  40S ribosomal protein S8

    See identical proteins and their annotated locations for XP_513132.1

    UniProtKB/TrEMBL
    H2PYW3
    Related
    ENSPTRP00000001146.4, ENSPTRT00000001259.5
    Conserved Domains (1) summary
    PTZ00148
    Location:1206
    PTZ00148; 40S ribosomal protein S8; Provisional
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