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CASP9 caspase 9 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456457, updated on 2-Nov-2023

Summary

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Official Symbol
CASP9provided by VGNC
Official Full Name
caspase 9provided by VGNC
Primary source
VGNC:VGNC:10585
Locus tag
CK820_G0044765
See related
Ensembl:ENSPTRG00000000200
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CASP9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (15585292..15617443, complement)

Chromosome 1 - NC_072398.1Genomic Context describing neighboring genes Neighboring gene chymotrypsin like elastase 2A Neighboring gene chymotrypsin like elastase 2B Neighboring gene DnaJ heat shock protein family (Hsp40) member C16 Neighboring gene small Cajal body-specific RNA 21 Neighboring gene agmatinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072398.1 Chromosome 1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase-9
Names
caspase 9, apoptosis-related cysteine peptidase
XP_009447095.2
XP_009447100.2
XP_009447104.2
XP_513049.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072398.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    15585292..15617443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009448829.3 → XP_009447104.2  caspase-9 isoform X4

  2. XM_009448820.3 → XP_009447095.2  caspase-9 isoform X2

    UniProtKB/TrEMBL
    K7AUW4

  3. XM_513049.7 → XP_513049.3  caspase-9 isoform X1

    UniProtKB/TrEMBL
    K7AUW4

  4. XM_009448825.3 → XP_009447100.2  caspase-9 isoform X3

    UniProtKB/TrEMBL
    K7AUW4
Nucleotide Protein
Heading Accession and Version

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