U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATF5 activating transcription factor 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456225, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
ATF5provided by VGNC
Official Full Name
activating transcription factor 5provided by VGNC
Primary source
VGNC:VGNC:2101
Locus tag
CK820_G0051514
See related
Ensembl:ENSPTRG00000011327
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (52878852..52883520)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (52878346..52883546)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene AKT1 substrate 1 Neighboring gene TBC1 domain family member 17 Neighboring gene interleukin 4 induced 1 Neighboring gene nucleoporin 62 Neighboring gene sialic acid binding Ig like lectin 11 Neighboring gene small nucleolar RNA U3 Neighboring gene sialic acid-binding Ig-like lectin 16

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cyclic AMP-dependent transcription factor ATF-5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    52878852..52883520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054672639.2 → XP_054528614.1  cyclic AMP-dependent transcription factor ATF-5

    UniProtKB/TrEMBL
    H2QGX0

  2. XM_016936633.3 → XP_016792122.3  cyclic AMP-dependent transcription factor ATF-5

    UniProtKB/TrEMBL
    H2QGX0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous