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GYS1 glycogen synthase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456196, updated on 29-Mar-2024

Summary

Official Symbol
GYS1provided by VGNC
Official Full Name
glycogen synthase 1provided by VGNC
Primary source
VGNC:VGNC:6631
Locus tag
CK820_G0042334
See related
Ensembl:ENSPTRG00000011269
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See GYS1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (51909864..51935082, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (51909891..51935049, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene BCL2 associated X, apoptosis regulator Neighboring gene ferritin light chain Neighboring gene RuvB like AAA ATPase 2 Neighboring gene luteinizing hormone subunit beta

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glycogen [starch] synthase, muscle
Names
glycogen synthase 1 (muscle)
XP_016791972.1
XP_016791973.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    51909864..51935082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016936483.4XP_016791972.1  glycogen [starch] synthase, muscle isoform X1

    UniProtKB/TrEMBL
    A0A2I3SFE3, A0A2J8K2C5, A0A6D2WGB0, H2R1A4, K7DM65
    Related
    ENSPTRP00000042044.3
    Conserved Domains (1) summary
    pfam05693
    Location:31663
    Glycogen_syn; Glycogen synthase
  2. XM_016936484.4XP_016791973.1  glycogen [starch] synthase, muscle isoform X2

    UniProtKB/TrEMBL
    A0A2I3SFE3
    Conserved Domains (3) summary
    cd03793
    Location:39614
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
    pfam05693
    Location:39662
    Glycogen_syn; Glycogen synthase
    pfam09007
    Location:664733
    EBP50_C; EBP50, C-terminal