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Pdp1 PAR-domain protein 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 45588, updated on 28-Aug-2019

Summary

Official Symbol
Pdp1provided by FlyBase
Official Full Name
PAR-domain protein 1provided by FlyBase
Primary source
FLYBASE:FBgn0016694
Locus tag
Dmel_CG17888
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.206; CG17888; DM1; DM32; Dmel\CG17888; mel_pdp1; pdp; PDP; Pdp-1; pdp1; PDP1; Pdp1 epsilon; Pdp1&e;gr; Pdp1e; pdp1epsilon; Pdp1epsilon; PDP1epsilon

Genomic context

See Pdp1 in Genome Data Viewer
Location:
66A14-66A17; 3-21 cM
Exon count:
12
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7811458..7867369, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7804558..7860469, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Clock Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene eukaryotic translation initiation factor 4E5

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

  • Circadian rhythm - fly, organism-specific biosystem (from KEGG)
    Circadian rhythm - fly, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In the fruit fly Drosophila melanogaster, seven genes ...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
circadian rhythm IDA
Inferred from Direct Assay
more info
PubMed 
circadian rhythm IGI
Inferred from Genetic Interaction
more info
PubMed 
circadian rhythm IMP
Inferred from Mutant Phenotype
more info
PubMed 
circadian rhythm TAS
Traceable Author Statement
more info
PubMed 
positive regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 
regulation of lipid metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IC
Inferred by Curator
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
PAR-domain protein 1
Names
CG17888-PB
CG17888-PC
CG17888-PD
CG17888-PF
CG17888-PG
CG17888-PI
CG17888-PJ
CG17888-PK
CG17888-PL
CG17888-PM
CG17888-PN
CG17888-PO
CG17888-PP
PAR domain protein 1epsilon
PAR-DOMAIN-PROTEIN 1
PAR-Domain protein 1
PAR-protein domain1
Par domain protein 1
Pdp1-PB
Pdp1-PC
Pdp1-PD
Pdp1-PF
Pdp1-PG
Pdp1-PI
Pdp1-PJ
Pdp1-PK
Pdp1-PL
Pdp1-PM
Pdp1-PN
Pdp1-PO
Pdp1-PP

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    7811458..7867369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_080093.5NP_524832.3  PAR-domain protein 1, isoform K [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524832.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KKI2
    Related
    FBpp0297493, FBtr0306535
    Conserved Domains (1) summary
    cd14695
    Location:203262
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  2. NM_001300044.1NP_001286973.1  PAR-domain protein 1, isoform P [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286973.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KKI2
    Related
    FBpp0312154, FBtr0346536
    Conserved Domains (1) summary
    cd14695
    Location:203262
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  3. NM_168233.3NP_729297.1  PAR-domain protein 1, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729297.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TVQ4
    Related
    FBpp0076490, FBtr0076775
    Conserved Domains (1) summary
    cd14695
    Location:183242
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  4. NM_001274618.1NP_001261547.1  PAR-domain protein 1, isoform O [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261547.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PBV3
    Related
    FBpp0304393, FBtr0332083
    Conserved Domains (1) summary
    cd14695
    Location:197256
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  5. NM_168234.3NP_729298.2  PAR-domain protein 1, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729298.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q24217
    Related
    FBpp0289726, FBtr0300499
    Conserved Domains (1) summary
    cd14695
    Location:165224
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  6. NM_168235.3NP_729299.1  PAR-domain protein 1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729299.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KKI2
    Related
    FBpp0076491, FBtr0076776
    Conserved Domains (1) summary
    cd14695
    Location:203262
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  7. NM_001274616.1NP_001261545.1  PAR-domain protein 1, isoform M [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261545.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PEP3
    Related
    FBpp0304391, FBtr0332081
    Conserved Domains (1) summary
    cd14695
    Location:208267
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  8. NM_001274617.1NP_001261546.1  PAR-domain protein 1, isoform N [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261546.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5U8V5
    Related
    FBpp0304392, FBtr0332082
    Conserved Domains (1) summary
    cd14695
    Location:214273
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  9. NM_168236.3NP_729300.1  PAR-domain protein 1, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729300.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TW49
    Related
    FBpp0076492, FBtr0076777
    Conserved Domains (1) summary
    cd14695
    Location:217276
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  10. NM_168238.3NP_729302.2  PAR-domain protein 1, isoform J [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729302.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQ99
    Related
    FBpp0289727, FBtr0300500
    Conserved Domains (1) summary
    cd14695
    Location:566625
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  11. NM_168237.2NP_729301.1  PAR-domain protein 1, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729301.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SZT1
    Related
    FBpp0076495, FBtr0076780
    Conserved Domains (1) summary
    cd14695
    Location:580639
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  12. NM_001274615.1NP_001261544.1  PAR-domain protein 1, isoform L [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261544.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PEX4
    Related
    FBpp0304390, FBtr0332080
    Conserved Domains (1) summary
    cd14695
    Location:514573
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  13. NM_168239.2NP_729303.1  PAR-domain protein 1, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729303.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQ98
    Related
    FBpp0076497, FBtr0076782
    Conserved Domains (1) summary
    cd14695
    Location:503562
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
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