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DDX39A DExD-box helicase 39A [ Pan troglodytes (chimpanzee) ]

Gene ID: 455783, updated on 8-Feb-2017
Gene symbol
DDX39A
Gene description
DExD-box helicase 39A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
DDX39
Orthologs
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Pan_tro 3.0 (GCF_000001515.7) 19 NC_006486.4 (15331344..15341865, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 19 NC_006486.3 (14702187..14713708, complement)

Chromosome 19 - NC_006486.4Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 37B Neighboring gene uncharacterized LOC104002879 Neighboring gene adhesion G protein-coupled receptor E5 Neighboring gene protein kinase N1 Neighboring gene prostaglandin E receptor 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
ATP-dependent RNA helicase DDX39A
Names
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
DEAD-box helicase 39A

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pan_tro 3.0 Primary Assembly

Genomic

  1. NC_006486.4 Reference Pan_tro 3.0 Primary Assembly

    Range
    15331344..15341865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016935303.1XP_016790792.1  ATP-dependent RNA helicase DDX39A

    UniProtKB/TrEMBL
    K7A9J4
    Conserved Domains (3) summary
    PTZ00424
    Location:33417
    PTZ00424; helicase 45; Provisional
    cd00079
    Location:263389
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd00268
    Location:46249
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
  2. XM_016935304.1XP_016790793.1  ATP-dependent RNA helicase DDX39A

    UniProtKB/TrEMBL
    K7A9J4
    Conserved Domains (3) summary
    PTZ00424
    Location:33417
    PTZ00424; helicase 45; Provisional
    cd00079
    Location:263389
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd00268
    Location:46249
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
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