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CDC42EP4 CDC42 effector protein 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 454859, updated on 29-Mar-2024

Summary

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Official Symbol
CDC42EP4provided by VGNC
Official Full Name
CDC42 effector protein 4provided by VGNC
Primary source
VGNC:VGNC:12049
Locus tag
CK820_G0039967
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (86264209..86291469, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (84448652..84475912, complement)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene component of oligomeric golgi complex 1 Neighboring gene VCP nuclear cofactor family member 1 Neighboring gene mitochondrial nucleoid associated protein 1 Neighboring gene cleavage and polyadenylation specific factor 4 like Neighboring gene small ribosomal subunit protein uS8-like Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene uncharacterized LOC134808920

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of pseudopodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cdc42 effector protein 4
Names
CDC42 effector protein (Rho GTPase binding) 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    86264209..86291469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001167935.6 → XP_001167935.1  cdc42 effector protein 4

    See identical proteins and their annotated locations for XP_001167935.1

    UniProtKB/TrEMBL
    A0A2J8KC11, A0A2J8KC30, A0A803KHQ4, H2QDS2
    Conserved Domains (2) summary
    pfam00786
    Location:26 → 69
    PBD; P21-Rho-binding domain
    pfam14957
    Location:112 → 228
    BORG_CEP; Cdc42 effector

  2. XM_009433184.5 → XP_009431459.1  cdc42 effector protein 4

    See identical proteins and their annotated locations for XP_009431459.1

    UniProtKB/TrEMBL
    A0A2J8KC11, A0A2J8KC30, A0A803KHQ4, H2QDS2
    Conserved Domains (2) summary
    pfam00786
    Location:26 → 69
    PBD; P21-Rho-binding domain
    pfam14957
    Location:112 → 228
    BORG_CEP; Cdc42 effector
Nucleotide Protein
Heading Accession and Version

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