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ESRRB estrogen related receptor beta [ Pan troglodytes (chimpanzee) ]

Gene ID: 453056, updated on 3-Dec-2024

Summary

Official Symbol
ESRRBprovided by VGNC
Official Full Name
estrogen related receptor betaprovided by VGNC
Primary source
VGNC:VGNC:12630
Locus tag
CK820_G0002944
See related
Ensembl:ENSPTRG00000006566
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See ESRRB in Genome Data Viewer
Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (74268121..74458208)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (67562927..67754401)

Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 L3-like Neighboring gene intraflagellar transport 43 Neighboring gene uncharacterized LOC134808378 Neighboring gene G-patch domain containing 2 like Neighboring gene uncharacterized LOC107968319 Neighboring gene cytochrome c, somatic-like

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
steroid hormone receptor ERR2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    74268121..74458208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024348811.3XP_024204579.1  steroid hormone receptor ERR2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8PK50
    Conserved Domains (2) summary
    cd06946
    Location:217436
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:103198
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
  2. XM_054666160.2XP_054522135.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3SNZ7, A0A2J8PK50, A0A2J8PK56, A0A6D2WS77
  3. XM_024348812.3XP_024204580.1  steroid hormone receptor ERR2 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RII0, A0A2J8PK71, A0A6D2X9S3
    Conserved Domains (2) summary
    cd06946
    Location:233452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
  4. XM_054666159.2XP_054522134.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8PK50
  5. XM_009428182.3XP_009426457.1  steroid hormone receptor ERR2 isoform X3

    See identical proteins and their annotated locations for XP_009426457.1

    UniProtKB/TrEMBL
    A0A2I3SNZ7, A0A2J8PK50, A0A2J8PK56, A0A6D2WS77
    Related
    ENSPTRP00000078695.1
    Conserved Domains (2) summary
    cd06946
    Location:212431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
  6. XM_063793017.1XP_063649087.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3SNZ7, A0A2J8PK50, A0A2J8PK56, A0A6D2WS77