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RB1 RB transcriptional corepressor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 452715, updated on 2-Nov-2023

Summary

Official Symbol
RB1provided by VGNC
Official Full Name
RB transcriptional corepressor 1provided by VGNC
Primary source
VGNC:VGNC:14463
Locus tag
CK820_G0031644
See related
Ensembl:ENSPTRG00000005864
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See RB1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 13 NC_072411.1 (49269565..49440304)

Chromosome 13 - NC_072411.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129136727 Neighboring gene integral membrane protein 2B Neighboring gene uncharacterized LOC101056985 Neighboring gene protein phosphatase 1 regulatory subunit 26-like Neighboring gene PEST proteolytic signal-containing nuclear protein-like Neighboring gene lysophosphatidic acid receptor 6 Neighboring gene uncharacterized LOC129136728 Neighboring gene RCC1 and BTB domain containing protein 2 Neighboring gene uncharacterized LOC129136729

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072411.1 Chromosome 13 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of Rb-E2F complex IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of chromatin IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
retinoblastoma-associated protein
Names
retinoblastoma 1 (including osteosarcoma)
retinoblastoma protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072411.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    49269565..49440304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054664916.1XP_054520891.1  retinoblastoma-associated protein isoform X6

    UniProtKB/TrEMBL
    A0A2I3T1W1
  2. XM_509777.5XP_509777.3  retinoblastoma-associated protein isoform X1

    See identical proteins and their annotated locations for XP_509777.3

    UniProtKB/TrEMBL
    A0A2I3T1W1, A0A2J8L8V8, A0A6D2Y5T6, H2Q7K0
    Related
    ENSPTRP00000009974.4
    Conserved Domains (4) summary
    pfam01857
    Location:646763
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:373573
    RB_A; Retinoblastoma-associated protein A domain
    pfam08934
    Location:768924
    Rb_C; Rb C-terminal domain
    pfam11934
    Location:114225
    DUF3452; Domain of unknown function (DUF3452)
  3. XM_054664912.1XP_054520887.1  retinoblastoma-associated protein isoform X2

    UniProtKB/TrEMBL
    A0A2I3T1W1
  4. XM_016925689.2XP_016781178.1  retinoblastoma-associated protein isoform X3

    UniProtKB/TrEMBL
    Q9BDQ3
  5. XM_054664913.1XP_054520888.1  retinoblastoma-associated protein isoform X4

  6. XM_054664915.1XP_054520890.1  retinoblastoma-associated protein isoform X5

  7. XM_054664914.1XP_054520889.1  retinoblastoma-associated protein isoform X5