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SP1 Sp1 transcription factor [ Pan troglodytes (chimpanzee) ]

Gene ID: 451939, updated on 2-Nov-2023

Summary

Official Symbol
SP1provided by VGNC
Official Full Name
Sp1 transcription factorprovided by VGNC
Primary source
VGNC:VGNC:5594
Locus tag
CK820_G0039535
See related
Ensembl:ENSPTRG00000005014
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See SP1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (41122228..41160687, complement)

Chromosome 12 - NC_072410.1Genomic Context describing neighboring genes Neighboring gene proline rich 13 Neighboring gene anti-Mullerian hormone receptor type 2 Neighboring gene Sp7 transcription factor Neighboring gene aladin WD repeat nucleoporin

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072410.1 Chromosome 12 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072410.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    41122228..41160687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016923339.3XP_016778828.1  transcription factor Sp1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RCN7
    Conserved Domains (4) summary
    COG5048
    Location:594665
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:581603
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:639661
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:625648
    zf-H2C2_2; Zinc-finger double domain
  2. XM_003313665.5XP_003313713.1  transcription factor Sp1 isoform X2

    See identical proteins and their annotated locations for XP_003313713.1

    UniProtKB/TrEMBL
    A0A2I3RCN7, A0A2J8KD37, A0A6D2XUV9, H2Q623
    Related
    ENSPTRP00000008536.4
    Conserved Domains (3) summary
    sd00017
    Location:629651
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:687709
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:673696
    zf-H2C2_2; Zinc-finger double domain
  3. XM_054663297.1XP_054519272.1  transcription factor Sp1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3RCN7
  4. XM_054663295.1XP_054519270.1  transcription factor Sp1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3RCN7