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MARCHF5 membrane associated ring-CH-type finger 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450607, updated on 29-Mar-2024

Summary

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Official Symbol
MARCHF5provided by VGNC
Official Full Name
membrane associated ring-CH-type finger 5provided by VGNC
Primary source
VGNC:VGNC:9748
Locus tag
CK820_G0004304
See related
Ensembl:ENSPTRG00000024274
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
MARCH5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (104532572..104593279)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (95149954..95212440)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene cytoplasmic polyadenylation element binding protein 3 Neighboring gene eukaryotic initiation factor 4A-I-like Neighboring gene NHP2 ribonucleoprotein pseudogene Neighboring gene uncharacterized LOC134807197 Neighboring gene insulin degrading enzyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH5; E3 ubiquitin-protein ligase MARCHF5
Names
membrane-associated ring finger (C3HC4) 5
XP_001145688.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    104532572..104593279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001145688.8 → XP_001145688.1  E3 ubiquitin-protein ligase MARCHF5

    See identical proteins and their annotated locations for XP_001145688.1

    UniProtKB/TrEMBL
    A0A2J8PE81, A0A5S6RBA3, H2R4C6
    Related
    ENSPTRP00000046954.4
    Conserved Domains (1) summary
    cd16701
    Location:12 → 72
    RING_CH-C4HC3_MARCH5; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH5 (MARCH5)
Nucleotide Protein
Heading Accession and Version

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