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NUDT5 nudix hydrolase 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450306, updated on 3-Dec-2024

Summary

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Official Symbol
NUDT5provided by VGNC
Official Full Name
nudix hydrolase 5provided by VGNC
Primary source
VGNC:VGNC:12411
Locus tag
CK820_G0034766
See related
Ensembl:ENSPTRG00000002294
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See NUDT5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (25042263..25070499, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (15391399..15419648, complement)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene dehydrogenase E1 and transketolase domain containing 1 Neighboring gene small nucleolar RNA U13 Neighboring gene SEC61 translocon subunit alpha 2 Neighboring gene cell division cycle 123 Neighboring gene uncharacterized LOC134807029 Neighboring gene calcium/calmodulin dependent protein kinase ID

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP-ribose diphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleoside phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-sugar pyrophosphatase
Names
nudix (nucleoside diphosphate linked moiety X)-type motif 5
nudix-type motif 5
XP_001138070.1
XP_054516066.1
XP_063636504.1
XP_063636505.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    25042263..25070499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054660091.1 → XP_054516066.1  ADP-sugar pyrophosphatase isoform X2

    UniProtKB/TrEMBL
    A0A2I3SDK9, A0A2J8KYT8

  2. XM_001138070.6 → XP_001138070.1  ADP-sugar pyrophosphatase isoform X1

    See identical proteins and their annotated locations for XP_001138070.1

    UniProtKB/TrEMBL
    A0A2I3RHP8, A0A2I3SFG6, A0A2J8KYR7, A0A2J8KYT2, A0A6D2XXZ2, A0A6D2Y596
    Related
    ENSPTRP00000064180.1
    Conserved Domains (1) summary
    cd03424
    Location:60 → 207
    ADPRase_NUDT5; ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, ...

  3. XM_063780434.1 → XP_063636504.1  ADP-sugar pyrophosphatase isoform X3

    UniProtKB/TrEMBL
    A0A2J8KYS4

  4. XM_063780435.1 → XP_063636505.1  ADP-sugar pyrophosphatase isoform X4

Nucleotide Protein
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