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GATA3 GATA binding protein 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450296, updated on 2-Nov-2023

Summary

Official Symbol
GATA3provided by VGNC
Official Full Name
GATA binding protein 3provided by VGNC
Primary source
VGNC:VGNC:3862
Locus tag
CK820_G0034811
See related
Ensembl:ENSPTRG00000023695
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See GATA3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (11240318..11269933)

Chromosome 10 - NC_072408.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 3 Neighboring gene uncharacterized LOC107976909 Neighboring gene uncharacterized LOC100610699 Neighboring gene uncharacterized LOC107976910 Neighboring gene pre-mRNA-splicing factor 38A-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072408.1 Chromosome 10 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
trans-acting T-cell-specific transcription factor GATA-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072408.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    11240318..11269933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016962624.3XP_016818113.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYY7, A0A6D2WHV1, H2R285
    Related
    ENSPTRP00000064658.1
    Conserved Domains (2) summary
    cd00202
    Location:317367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl27975
    Location:1261
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
  2. XM_016962623.3XP_016818112.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYY7, A0A6D2WHV1, H2R285
    Related
    ENSPTRP00000066548.1
    Conserved Domains (2) summary
    cd00202
    Location:317367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl27975
    Location:1261
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
  3. XM_009457913.4XP_009456188.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X2

    See identical proteins and their annotated locations for XP_009456188.1

    UniProtKB/TrEMBL
    A0A2J8KYX2
    Conserved Domains (2) summary
    cd00202
    Location:316366
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl27975
    Location:1244
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
  4. XM_507651.8XP_507651.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    See identical proteins and their annotated locations for XP_507651.1

    UniProtKB/TrEMBL
    A0A2J8KYY7, A0A6D2WHV1, H2R285
    Related
    ENSPTRP00000043539.2
    Conserved Domains (2) summary
    cd00202
    Location:317367
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl27975
    Location:1261
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)