Format

Send to:

Choose Destination

ck2a casein kinase 2 alpha subunit [ Ciona intestinalis (vase tunicate) ]

Gene ID: 445749, updated on 28-Oct-2019

Summary

Gene symbol
ck2a
Gene description
casein kinase 2 alpha subunit
See related
Ensembl:ENSCING00000009515
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona

Genomic context

See ck2a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 3 NC_020168.2 (2035344..2043877, complement)

Chromosome 3 - NC_020168.2Genomic Context describing neighboring genes Neighboring gene lysine--tRNA ligase Neighboring gene cilia- and flagella-associated protein 20 Neighboring gene uncharacterized LOC104265509 Neighboring gene transcription factor protein Neighboring gene protein spire homolog 2

Genomic regions, transcripts, and products

Genomic Sequence:
NC_020168.2 Chromosome 3 Reference KH Primary Assembly

Pathways from BioSystems

  • Mitophagy - animal, organism-specific biosystem (from KEGG)
    Mitophagy - animal, organism-specific biosystemMitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process calle...
  • Mitophagy - animal, conserved biosystem (from KEGG)
    Mitophagy - animal, conserved biosystemMitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process calle...
  • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
  • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
  • Wnt signaling pathway, organism-specific biosystem (from KEGG)
    Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
  • Wnt signaling pathway, conserved biosystem (from KEGG)
    Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

General protein information

Preferred Names
casein kinase 2 alpha subunit

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001032548.1NP_001027720.1  casein kinase 2 alpha subunit

    See identical proteins and their annotated locations for NP_001027720.1

    Status: PROVISIONAL

    Source sequence(s)
    AY092081
    UniProtKB/TrEMBL
    Q8T3S5
    Related
    ENSCINP00000019380, ENSCINT00000019380
    Conserved Domains (2) summary
    cd14132
    Location:18324
    STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2
    pfam00069
    Location:37323
    Pkinase; Protein kinase domain

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020168.2 Reference KH Primary Assembly

    Range
    2035344..2043877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026833547.1XP_026689348.1  casein kinase 2 alpha subunit isoform X1

  2. XM_026833548.1XP_026689349.1  casein kinase 2 alpha subunit isoform X2

Support Center