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stambpl1.L STAM binding protein like 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444711, updated on 11-Apr-2024

Summary

Official Symbol
stambpl1.L
Official Full Name
STAM binding protein like 1 L homeolog
Primary source
Xenbase:XB-GENE-5752536
Locus tag
XELAEV_18034369mg
See related
EnsemblRapid:ENSXLAG00005036555
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
stambpl1
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Genomic context

See stambpl1.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (6875264..6906106)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (6900019..6931668)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene lipase A, lysosomal acid, cholesterol esterase L homeolog Neighboring gene ankyrin repeat domain 22 L homeolog Neighboring gene actin, alpha 2, smooth muscle, aorta L homeolog Neighboring gene Fas cell surface death receptor L homeolog

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC84444

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
STAM binding protein like 1 L homeolog
Names
STAM binding protein-like 1
NP_001086282.1
XP_018079986.1
XP_018079987.1
XP_018079988.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092813.1NP_001086282.1  STAM binding protein like 1 L homeolog

    See identical proteins and their annotated locations for NP_001086282.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074422
    UniProtKB/TrEMBL
    A0A974CAW7, Q6GLN8
    Related
    ENSXLAP00005109409.1, ENSXLAT00005111598.1
    Conserved Domains (2) summary
    cd08066
    Location:261431
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:28131
    USP8_dimer; USP8 dimerization domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    6875264..6906106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018224497.2XP_018079986.1  STAM binding protein like 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FII0, A0A974CAW7, A0A974HB18
  2. XM_018224498.2XP_018079987.1  STAM binding protein like 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FII0, A0A974CAW7, A0A974HB18
    Related
    ENSXLAP00005109405.1, ENSXLAT00005111594.1
  3. XM_018224499.2XP_018079988.1  STAM binding protein like 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FII0, A0A974CAW7, A0A974HB18
    Related
    ENSXLAP00005109404.1, ENSXLAT00005111593.1