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nr1d1.L nuclear receptor subfamily 1 group D member 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444369, updated on 8-Apr-2017

Summary

Official Symbol
nr1d1.L
Official Full Name
nuclear receptor subfamily 1 group D member 1 L homeolog
Primary source
Xenbase:XB-GENE-865140
Locus tag
XELAEV_18043150mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ear1; hrev; ear-1; nr1d1; thra1; thral

Genomic context

See nr1d1.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (1809984..1817045)

Chromosome 9_10L - NC_030740.1Genomic Context describing neighboring genes Neighboring gene CASC3, exon junction complex subunit L homeolog Neighboring gene male-specific lethal 1 homolog L homeolog Neighboring gene thyroid hormone receptor alpha L homeolog Neighboring gene mediator complex subunit 24 L homeolog Neighboring gene colony stimulating factor 3 L homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030740.1 Chromosome 9_10L Reference Xenopus_laevis_v2 Primary Assembly

General protein information

Preferred Names
nuclear receptor subfamily 1 group D member 1 L homeolog
Names
nuclear receptor subfamily 1, group D, member 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092471.1NP_001085940.1  nuclear receptor subfamily 1 group D member 1 L homeolog

    See identical proteins and their annotated locations for NP_001085940.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073584
    UniProtKB/TrEMBL
    Q6GND0
    Conserved Domains (2) summary
    cd06940
    Location:328516
    NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
    cd07166
    Location:110198
    NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030740.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    1809984..1817045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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