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dhx8.S DEAH-box helicase 8 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444315, updated on 4-Nov-2022

Summary

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Official Symbol
dhx8.S
Official Full Name
DEAH-box helicase 8 S homeolog
Primary source
Xenbase:XB-GENE-6087203
Locus tag
XELAEV_18046516mg
See related
EnsemblRapid:ENSXLAG00005031011
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ddx8; dhx8; hrh1; prp22; prpf22
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Genomic context

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See dhx8.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (31263701..31296177)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (25801160..25819105)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DHX8-like Neighboring gene uncharacterized LOC121398850 Neighboring gene protein kinase C delta type-like Neighboring gene U6 spliceosomal RNA Neighboring gene cadherin 22 S homeolog Neighboring gene CD40 molecule, TNF receptor superfamily member 5 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80994

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX8; DEAH-box helicase 8 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    31263701..31296177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041578281.1 → XP_041434215.1  ATP-dependent RNA helicase DHX8

    UniProtKB/TrEMBL
    A0A8J1LZR9
    Related
    ENSXLAP00005092974.1, ENSXLAT00005094657.1
    Conserved Domains (2) summary
    COG1643
    Location:399 → 1061
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:107 → 185
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...

  2. XM_041578280.1 → XP_041434214.1  ATP-dependent RNA helicase DHX8

    UniProtKB/TrEMBL
    A0A8J1LZR9
    Related
    ENSXLAP00005093376.1, ENSXLAT00005095059.1
    Conserved Domains (2) summary
    COG1643
    Location:399 → 1061
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:107 → 185
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001092419.1: Suppressed sequence

    Description
    NM_001092419.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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