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DPY19L2P3 DPY19L2 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 442524, updated on 25-Oct-2022

Summary

Official Symbol
DPY19L2P3provided by HGNC
Official Full Name
DPY19L2 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:22367
See related
Ensembl:ENSG00000291213 AllianceGenome:HGNC:22367
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.1), fat (RPKM 0.5) and 21 other tissues See more
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Genomic context

See DPY19L2P3 in Genome Data Viewer
Location:
7p14.3
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (29685154..29742621)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (29822977..29880441)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (29724770..29782237)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene TMSB4X pseudogene 3 Neighboring gene uncharacterized LOC646762 Neighboring gene microRNA 550a-3 Neighboring gene zinc and ring finger 2 pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 13440 Neighboring gene hESC enhancers GRCh37_chr7:29832406-29833236 and GRCh37_chr7:29833237-29834066

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036482.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 3' end and lacks most of the 3' exons compared to variant 3.
    Source sequence(s)
    BC036244
    Related
    ENST00000602980.1
  2. NR_158194.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007276

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    29685154..29742621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    29822977..29880441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005216.3: Suppressed sequence

    Description
    NG_005216.3: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  2. NG_026547.1: Suppressed sequence

    Description
    NG_026547.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  3. NR_036554.1: Suppressed sequence

    Description
    NR_036554.1: This RefSeq was removed because there is insufficient support for the transcript.