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RPS4XP9 ribosomal protein S4X pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 442257, updated on 10-Oct-2023

Summary

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Official Symbol
RPS4XP9provided by HGNC
Official Full Name
ribosomal protein S4X pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:35792
See related
AllianceGenome:HGNC:35792
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS4P9; RPS4X_4_749
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Genomic context

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See RPS4XP9 in Genome Data Viewer
Location:
6q22.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (126683013..126683909)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (127871640..127872536)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (127004158..127005054)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377992 Neighboring gene PRELID1 pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:126994686-126995322 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:126995323-126995959 Neighboring gene YAP1 pseudogene 3 Neighboring gene uncharacterized LOC105377993 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25037 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25038 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17525 Neighboring gene uncharacterized LOC105377989 Neighboring gene uncharacterized LOC105377991

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ribosomal protein S4, X-linked pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010761.1 

    Range
    101..997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    126683013..126683909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    127871640..127872536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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