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CALR4P calreticulin 4, pseudogene [ Homo sapiens (human) ]

Gene ID: 441884, updated on 17-Jun-2024

Summary

Official Symbol
CALR4Pprovided by HGNC
Official Full Name
calreticulin 4, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:35456
See related
AllianceGenome:HGNC:35456
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See CALR4P in Genome Data Viewer
Location:
1p32.3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (51561866..51583731, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (51441770..51463646, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (52027538..52049403, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15 Neighboring gene RNA, U6 small nuclear 877, pseudogene Neighboring gene MPRA-validated peak220 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1023 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1024 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:51984193-51985121 Neighboring gene EPS15 antisense RNA 1 Neighboring gene RNA, U6 small nuclear 1281, pseudogene Neighboring gene oxysterol binding protein like 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1025 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1026 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:52073806-52073988 Neighboring gene uncharacterized LOC105378719 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:52082461-52083369 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:52083370-52084277 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:52087823-52089022 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:52113492-52113700 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 51

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_161259.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL772260

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    51561866..51583731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    51441770..51463646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)