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MIR2052HG MIR2052 host gene [ Homo sapiens (human) ]

Gene ID: 441355, updated on 18-Jul-2024

Summary

Official Symbol
MIR2052HGprovided by HGNC
Official Full Name
MIR2052 host geneprovided by HGNC
Primary source
HGNC:HGNC:51555
See related
Ensembl:ENSG00000254349 AllianceGenome:HGNC:51555
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See MIR2052HG in Genome Data Viewer
Location:
8q21.11-q21.13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (74599866..74758352)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (75029303..75187790)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (75512101..75670587)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27542 Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene microRNA 5681a Neighboring gene microRNA 5681b Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:75513719-75514918 Neighboring gene long intergenic non-protein coding RNA 3071 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:75560326-75560913 Neighboring gene PCBP2 pseudogene 2 Neighboring gene microRNA 2052 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:75720049-75720586 Neighboring gene peptidase inhibitor 15 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:75859985-75860622 Neighboring gene uncharacterized LOC124901964 Neighboring gene cysteine rich secretory protein LCCL domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
EBI GWAS Catalog

General gene information

Markers

Clone Names

  • FLJ39080

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033830.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026616, AK096399
    Related
    ENST00000523118.5
  2. NR_197229.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026616, AC115837

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    74599866..74758352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    75029303..75187790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)