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LOC441242 uncharacterized LOC441242 [ Homo sapiens (human) ]

Gene ID: 441242, updated on 11-Jun-2021

Summary

Gene symbol
LOC441242
Gene description
uncharacterized LOC441242
See related
Ensembl:ENSG00000272693
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 1.4), prostate (RPKM 1.3) and 25 other tissues See more
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Genomic context

See LOC441242 in Genome Data Viewer
Location:
7q11.21
Exon count:
11
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (65647010..65770810, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (65111924..65235797, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 4 pseudogene Neighboring gene uncharacterized LOC105375333 Neighboring gene glutamate metabotropic receptor 8 pseudogene Neighboring gene integrator complex subunit 4 pseudogene 2 Neighboring gene small nucleolar RNA, H/ACA box 15B-2 Neighboring gene chaperonin containing TCP1 subunit 6 pseudogene 1 Neighboring gene small nucleolar RNA, H/ACA box 22 Neighboring gene general transcription factor IIi pseudogene 5 Neighboring gene RNA, U6 small nuclear 912, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038378.4 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC073107, BC066990
    Related
    ENST00000633579.1
  2. NR_103527.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks several exons and contains alternate 5' and 3' terminal exons, compared to variant 1.
    Source sequence(s)
    AA745086, AC073107, AI935622, BX461661, BX647963, CN483231, DB316860

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    65647010..65770810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013464.1: Suppressed sequence

    Description
    NM_001013464.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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