U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02981 long intergenic non-protein coding RNA 2981 [ Homo sapiens (human) ]

Gene ID: 441204, updated on 13-May-2022

Summary

Official Symbol
LINC02981provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2981provided by HGNC
Primary source
HGNC:HGNC:56055
See related
Ensembl:ENSG00000214870
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in brain (RPKM 3.5), fat (RPKM 2.3) and 21 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC02981 in Genome Data Viewer
Location:
7p15.2
Exon count:
10
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (26398569..26540950)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (26534255..26676631)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (26438189..26580569)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ribosomal protein L23 pseudogene 7 Neighboring gene sorting nexin 10 Neighboring gene SNX10 antisense RNA 1 Neighboring gene uncharacterized LOC105375202 Neighboring gene VISTA enhancer hs769 Neighboring gene uncharacterized LOC124901605 Neighboring gene KIAA0087 lncRNA Neighboring gene long intergenic non-protein coding RNA 3095 Neighboring gene uncharacterized LOC101928077

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ42480, AC004540.5

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_148499.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540, AC004947
  2. NR_148500.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540, AC004947
  3. NR_148501.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540, AC004947
  4. NR_148502.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540, AC004947
  5. NR_148503.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540, AK056484, BC039415
  6. NR_148504.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004540
  7. NR_148505.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) lacks multiple 3' exons and contains an alternate 3' exon compared to variant 1.
    Source sequence(s)
    AA806478, AC004540, BX097017, DA363385
    Related
    ENST00000449537.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    26398569..26540950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    26534255..26676631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_015364.2: Suppressed sequence

    Description
    NR_015364.2: This RefSeq was removed because this transcript is thought to be partial.