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LINC02487 long intergenic non-protein coding RNA 2487 [ Homo sapiens (human) ]

Gene ID: 441178, updated on 25-Jan-2022

Summary

Official Symbol
LINC02487provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2487provided by HGNC
Primary source
HGNC:HGNC:53466
See related
Ensembl:ENSG00000203688 AllianceGenome:HGNC:53466
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward esophagus (RPKM 19.4) See more
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Genomic context

See LINC02487 in Genome Data Viewer
Location:
6q27
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (167680691..167696289, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (168080306..168084467, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378131 Neighboring gene long intergenic non-protein coding RNA 2538 Neighboring gene uncharacterized LOC107986547 Neighboring gene serine palmitoyltransferase long chain base subunit 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_117092.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL009178, AL356123
    Related
    ENST00000644320.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    167680691..167696289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001025489.1: Suppressed sequence

    Description
    NM_001025489.1: This RefSeq was permanently suppressed because currently insufficient support exists for the transcript and the protein.
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