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NHSL1-AS1 NHSL1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 441172, updated on 13-May-2022

Summary

Official Symbol
NHSL1-AS1provided by HGNC
Official Full Name
NHSL1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40947
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in brain (RPKM 3.0), spleen (RPKM 2.6) and 22 other tissues See more
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Genomic context

See NHSL1-AS1 in Genome Data Viewer
Location:
6q24.1
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (138691668..138697288)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (139880205..139885825)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (139012805..139018425)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene NHS like 1 Neighboring gene Sharpr-MPRA regulatory region 8531 Neighboring gene MTCH1 pseudogene 1 Neighboring gene collagen alpha-1(III) chain-like Neighboring gene CCDC28A antisense RNA 1 Neighboring gene coiled-coil domain containing 28A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033896.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL590617, BC071813

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    138691668..138697288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    139880205..139885825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)