U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IL6ST-DT IL6ST divergent transcript [ Homo sapiens (human) ]

Gene ID: 441072, updated on 13-May-2022

Summary

Official Symbol
IL6ST-DTprovided by HGNC
Official Full Name
IL6ST divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55804
See related
Ensembl:ENSG00000227908 AllianceGenome:HGNC:55804
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See IL6ST-DT in Genome Data Viewer
Location:
5q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (55995167..56003649)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (56823591..56832073)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (55290995..55299477)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein H1 pseudogene 3 Neighboring gene interleukin 31 receptor A Neighboring gene interleukin 6 cytokine family signal transducer Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 5314 Neighboring gene uncharacterized LOC105378976 Neighboring gene Sharpr-MPRA regulatory region 6268 Neighboring gene ankyrin repeat domain 55

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102755.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC016596, BC039324
    Related
    ENST00000500093.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    55995167..56003649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    56823591..56832073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)