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BAIAP2-DT BAIAP2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 440465, updated on 13-May-2022

Summary

Official Symbol
BAIAP2-DTprovided by HGNC
Official Full Name
BAIAP2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:44342
See related
Ensembl:ENSG00000226137 AllianceGenome:HGNC:44342
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BAIAP2-AS1; lnc-BAIAP2
Expression
Ubiquitous expression in brain (RPKM 9.6), lung (RPKM 7.0) and 23 other tissues See more
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Genomic context

See BAIAP2-DT in Genome Data Viewer
Location:
17q25.3
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (81029133..81034719, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (81937509..81943095, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (79002933..79008519, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC124904078 Neighboring gene BAR/IMD domain containing adaptor protein 2 Neighboring gene Sharpr-MPRA regulatory region 8367 Neighboring gene Sharpr-MPRA regulatory region 11647 Neighboring gene apoptosis associated tyrosine kinase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • BAIAP2 antisense RNA 1 (head to head)
  • BAIAP2 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ14444, FLJ31993, FLJ39290, FLJ42772, FLJ90757, MGC131745

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026857.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC127496
    Related
    ENST00000573167.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    81029133..81034719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    81937509..81943095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004336.2: Suppressed sequence

    Description
    NM_001004336.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.