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SUZ12P1 SUZ12 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 440423, updated on 13-May-2022

Summary

Official Symbol
SUZ12P1provided by HGNC
Official Full Name
SUZ12 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:32421
See related
AllianceGenome:HGNC:32421
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SUZ12P
Expression
Ubiquitous expression in testis (RPKM 9.6), brain (RPKM 8.2) and 25 other tissues See more
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Genomic context

See SUZ12P1 in Genome Data Viewer
Location:
17q11.2
Exon count:
12
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (30709608..30792830)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (31654592..31737805)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (29036626..29119848)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371723 Neighboring gene NF1-REPa PRS2 recombination region Neighboring gene RNA, 7SL, cytoplasmic 316, pseudogene Neighboring gene SUZ12P1 PRS4 recombination region Neighboring gene cytokine receptor like factor 3 Neighboring gene Sharpr-MPRA regulatory region 4018 Neighboring gene ribosomal protein S17 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • SUZ12 polycomb repressive complex 2 subunit pseudogene 1
  • suppressor of zeste 12 homolog pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024187.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005562, AC127024, BM689948
  2. NR_144393.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC127024, BC041912, CA433099
  3. NR_144394.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC127024, AW137408, BG546178, CA433099
  4. NR_144395.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC127024, AW137408, BG546178, CA433099

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    30709608..30792830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    31654592..31737805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005675.2: Suppressed sequence

    Description
    NG_005675.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
  2. NG_026240.1: Suppressed sequence

    Description
    NG_026240.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.