Format

Send to:

Choose Destination

CCDC144NL-AS1 CCDC144NL antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 440416, updated on 18-Apr-2021

Summary

Official Symbol
CCDC144NL-AS1provided by HGNC
Official Full Name
CCDC144NL antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:51340
See related
Ensembl:ENSG00000233098
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.7), placenta (RPKM 0.3) and 1 other tissue See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CCDC144NL-AS1 in Genome Data Viewer
Location:
17p11.2
Exon count:
7
Annotation release Status Assembly Chr Location
109.20210226 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (20868527..20930041)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20771840..20833354)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene stearoyl-CoA desaturase pseudogene 1 Neighboring gene ABHD17A pseudogene 6 Neighboring gene CCDC144A N-terminal pseudogene Neighboring gene RNA, U6 small nuclear 1178, pseudogene Neighboring gene ribonuclease H1 pseudogene 1 Neighboring gene uncharacterized LOC339260 Neighboring gene SPECC1 pseudogene 2 Neighboring gene ubiquitin specific peptidase 22

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104185.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK057473, BC041488
    Related
    ENST00000583962.2
  2. NR_160710.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI143571, AL711205, BX112256, CN415461
  3. NR_160711.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090774

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210226

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    20868527..20930041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center