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TTLL13 tubulin tyrosine ligase like 13 [ Homo sapiens (human) ]

Gene ID: 440307, updated on 27-Nov-2021

Summary

Official Symbol
TTLL13provided by HGNC
Official Full Name
tubulin tyrosine ligase like 13provided by HGNC
Primary source
HGNC:HGNC:32484
See related
Ensembl:ENSG00000213471
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTLL13P
Expression
Restricted expression toward testis (RPKM 11.1) See more
Orthologs
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Genomic context

See TTLL13 in Genome Data Viewer
Location:
15q26.1
Exon count:
15
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (90249556..90265477)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (90792764..90802320)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene semaphorin 4B Neighboring gene ribosomal protein S12 pseudogene 26 Neighboring gene calcium and integrin binding 1 Neighboring gene GDP-D-glucose phosphorylase 1 Neighboring gene neugrin, neurite outgrowth associated Neighboring gene nucleolar protein interacting with the FHA domain of MKI67 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: NGRN

Homology

Clone Names

  • FLJ46079, MGC33417

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables tubulin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables tubulin-glutamic acid ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables tubulin-glutamic acid ligase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables tubulin-glutamic acid ligase activity TAS
Traceable Author Statement
more info
 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein polyglutamylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein polyglutamylation TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
tubulin polyglutamylase TTLL13P
Names
tubulin polyglutamylase TTLL13
tubulin tyrosine ligase like 13, pseudogene
tubulin tyrosine ligase-like family, member 13
tubulin--tyrosine ligase-like protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396017.1NP_001382946.1  tubulin polyglutamylase TTLL13P

    Status: VALIDATED

    Source sequence(s)
    AC091167

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    90249556..90265477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001029964.2: Suppressed sequence

    Description
    NM_001029964.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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