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UBL7-DT UBL7 divergent transcript [ Homo sapiens (human) ]

Gene ID: 440288, updated on 14-Dec-2021

Summary

Official Symbol
UBL7-DTprovided by HGNC
Official Full Name
UBL7 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:48614
See related
Ensembl:ENSG00000247240
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UBL7-AS1
Expression
Ubiquitous expression in testis (RPKM 2.5), lymph node (RPKM 2.0) and 25 other tissues See more
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Genomic context

See UBL7-DT in Genome Data Viewer
Location:
15q24.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (74461265..74481292)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (74753606..74773633)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 521 Neighboring gene semaphorin 7A (John Milton Hagen blood group) Neighboring gene ubiquitin like 7 Neighboring gene uncharacterized LOC102723714 Neighboring gene Sharpr-MPRA regulatory region 9638 Neighboring gene AT-rich interaction domain 3B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038448.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AW081069, BC121819, DB092848
    Related
    ENST00000564621.2
  2. NR_038449.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site and lacks an alternate exon, compared to variant 1, resulting in a shorter transcript.
    Source sequence(s)
    AW081069, BC014373
    Related
    ENST00000499217.6
  3. NR_120377.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate splice site and lacks an alternate exon, compared to variant 1, resulting in a shorter transcript.
    Source sequence(s)
    BC014373, BX104607
    Related
    ENST00000657781.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    74461265..74481292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160016.1 Reference GRCh38.p13 PATCHES

    Range
    290534..310561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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