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DDX12P DEAD/H-box helicase 12, pseudogene [ Homo sapiens (human) ]

Gene ID: 440081, updated on 5-Jan-2022

Summary

Official Symbol
DDX12Pprovided by HGNC
Official Full Name
DEAD/H-box helicase 12, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:2737
See related
MIM:601151
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CHLR2; DDX12
Summary
Predicted to enable DNA helicase activity. Predicted to be involved in DNA duplex unwinding and establishment of sister chromatid cohesion. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Broad expression in bone marrow (RPKM 14.1), lymph node (RPKM 7.1) and 25 other tissues See more
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Genomic context

See DDX12P in Genome Data Viewer
Location:
12p13.31
Exon count:
27
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (9417691..9448172, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (9570287..9600768, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ovostatin homolog 2 Neighboring gene uncharacterized LOC105369647 Neighboring gene uncharacterized LOC107987172 Neighboring gene alpha-2-macroglobulin like 1 pseudogene Neighboring gene RAN binding protein 6 pseudogene Neighboring gene uncharacterized LOC107987174 Neighboring gene killer cell lectin like receptor B1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • CHL1-like helicase homolog 2
  • CHL1-related protein 2
  • DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae)
  • DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene
  • DEAD/H box protein 12
  • DEAD/H box-12
  • hCHLR2
  • probable ATP-dependent RNA helicase DDX12

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA helicase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA duplex unwinding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in establishment of sister chromatid cohesion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in nucleobase-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033399.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092821, AC141557

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    9417691..9448172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_004400.1: Suppressed sequence

    Description
    NM_004400.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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