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rac3a Rac family small GTPase 3a [ Danio rerio (zebrafish) ]

Gene ID: 437027, updated on 17-Nov-2020

Summary

Official Symbol
rac3aprovided by ZNC
Official Full Name
Rac family small GTPase 3aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-256
See related
Ensembl:ENSDARG00000090062
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ra; rac3; wu:fb95b01; zgc:100831
Orthologs

Genomic context

See rac3a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (36248851..36259930, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (36119119..36130332, complement)
103 previous assembly Zv9 (GCF_000002035.4) 3 NC_007114.5 (36247965..36259076, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene dihydrouridine synthase 1-like (S. cerevisiae) Neighboring gene G protein pathway suppressor 1 Neighboring gene protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a Neighboring gene zgc:86896

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
GTP binding IEA
Inferred from Electronic Annotation
more info
 
GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
GTPase activity IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
actin filament organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cortical cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
establishment or maintenance of cell polarity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of cell shape IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell cortex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ras-related C3 botulinum toxin substrate 3a
Names
ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
ras-related C3 botulinum toxin substrate 3a (rho family, small GTP binding protein Rac3)
NP_001002754.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002754.2NP_001002754.1  ras-related C3 botulinum toxin substrate 3a

    See identical proteins and their annotated locations for NP_001002754.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076433
    UniProtKB/TrEMBL
    Q6DGB7
    Related
    ENSDARP00000111723.2, ENSDART00000126588.3
    Conserved Domains (1) summary
    cd01871
    Location:3176
    Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    36248851..36259930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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