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tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 [ Danio rerio (zebrafish) ]

Gene ID: 436866, updated on 26-Nov-2016
Official Symbol
tnfsf10provided by ZNC
Official Full Name
tumor necrosis factor (ligand) superfamily, member 10provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-335
See related
Ensembl:ENSDARG00000057241 Vega:OTTDARG00000021368
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
tnfsf10l2; zgc:92320
Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCz10 (GCF_000002035.5) 24 NC_007135.6 (26853313..26858367)
103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (27802775..27807780)

Chromosome 24 - NC_007135.6Genomic Context describing neighboring genes Neighboring gene neutral cholesterol ester hydrolase 1-like Neighboring gene neutral cholesterol ester hydrolase 1b, tandem duplicate 1 Neighboring gene male-specific lethal 2 homolog b (Drosophila) Neighboring gene stromal antigen 1b

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
cytokine activity IEA
Inferred from Electronic Annotation
more info
 
tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
immune response IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular space IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
tumor necrosis factor ligand superfamily member 10
Names
DL2
TNFSF10-1
tumor necrosis factor (ligand) superfamily, member 10 like 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002593.2NP_001002593.1  tumor necrosis factor ligand superfamily member 10 isoform 1

    See identical proteins and their annotated locations for NP_001002593.1

    Status: VALIDATED

    Source sequence(s)
    BC076005, CR376848, EH448113, EH499289, EH525548
    UniProtKB/TrEMBL
    Q6DHG9
    Related
    ENSDARP00000074299, OTTDARP00000022240, ENSDART00000079848, OTTDART00000027141
    Conserved Domains (1) summary
    pfam00229
    Location:159298
    TNF; TNF(Tumour Necrosis Factor) family
  2. NM_001328527.1NP_001315456.1  tumor necrosis factor ligand superfamily member 10 isoform 2

    Status: VALIDATED

    Source sequence(s)
    BC076005, CR376848, EH448113, EH499289, EH525548
    UniProtKB/TrEMBL
    Q6DHG9

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz10 Primary Assembly

Genomic

  1. NC_007135.6 Reference GRCz10 Primary Assembly

    Range
    26853313..26858367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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