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rhocb ras homolog family member Cb [ Danio rerio (zebrafish) ]

Gene ID: 436718, updated on 17-Nov-2020

Summary

Official Symbol
rhocbprovided by ZNC
Official Full Name
ras homolog family member Cbprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-144
See related
Ensembl:ENSDARG00000018328
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
rh; rhoad; zgc:92350
Orthologs

Genomic context

See rhocb in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (27555372..27624329)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (27536233..27605190)
103 previous assembly Zv9 (GCF_000002035.4) 8 NC_007119.5 (28408315..28477272)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 3b Neighboring gene uncharacterized LOC101886754 Neighboring gene uncharacterized LOC101883064 Neighboring gene uncharacterized LOC110440015 Neighboring gene Moloney leukemia virus 10b, tandem duplicate 2 Neighboring gene Moloney leukemia virus 10b, tandem duplicate 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
GTP binding IEA
Inferred from Electronic Annotation
more info
 
GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
GTPase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
actin filament organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell migration IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cortical cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
establishment or maintenance of cell polarity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of cell shape IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
skeletal muscle satellite cell migration ISS
Inferred from Sequence or Structural Similarity
more info
 
small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 
wound healing, spreading of cells ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cell cortex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
rho-related GTP-binding protein RhoA-D
Names
ras homolog gene family, member Ad
rho-related GTP-binding protein RhoC
NP_001002445.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002445.1NP_001002445.1  rho-related GTP-binding protein RhoA-D

    See identical proteins and their annotated locations for NP_001002445.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076026
    UniProtKB/Swiss-Prot
    Q6DHE8
    Related
    ENSDARP00000002761.7, ENSDART00000016696.8
    Conserved Domains (2) summary
    smart00174
    Location:8180
    RHO; Rho (Ras homology) subfamily of Ras-like small GTPases
    cd01870
    Location:5179
    RhoA_like; Ras homology family A (RhoA)-like includes RhoA, RhoB and RhoC

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    27555372..27624329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394727.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    552139..593364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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