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Trav9-2 T cell receptor alpha variable 9-2 [ Mus musculus (house mouse) ]

Gene ID: 436479, updated on 2-Nov-2024

Summary

Official Symbol
Trav9-2provided by MGI
Official Full Name
T cell receptor alpha variable 9-2provided by MGI
Primary source
MGI:MGI:4439903
See related
Ensembl:ENSMUSG00000094966 IMGT/GENE-DB:TRAV9-2; AllianceGenome:MGI:4439903
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm16979
Summary
Orthologous to several human genes including TRAV8-3 (T cell receptor alpha variable 8-3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Trav9-2 in Genome Data Viewer
Location:
14 C2; 14 27.43 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (53828537..53828961)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (53591080..53591504)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene T cell receptor alpha chain Neighboring gene T cell receptor alpha variable 15-1-DV6-1 Neighboring gene STARR-seq mESC enhancer starr_36720 Neighboring gene T cell receptor alpha variable 3-2 Neighboring gene T cell receptor alpha variable 4-3 Neighboring gene T cell receptor alpha variable 5-2

Genomic regions, transcripts, and products

General gene information

Other Names

  • T cell receptor alpha chain variable region 9-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007044.1 

    Range
    1163614..1164038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    53828537..53828961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001040460.1: Suppressed sequence

    Description
    NM_001040460.1: This RefSeq was permanently suppressed because immunoglobulins and T-cell receptor loci are out of scope for RefSeq projects.