U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4352409 uncharacterized LOC4352409 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4352409, updated on 17-Jul-2024
Gene symbol
LOC4352409
Gene description
uncharacterized LOC4352409
Locus tag
OSNPB_120533800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4352409 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (21898231..21901850, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (21225800..21229467, complement)

Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase I subunit rpa43 Neighboring gene phenylalanine--tRNA ligase, chloroplastic/mitochondrial Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uncharacterized protein LOC4352409
Names
Os12g0533800
mitochondrial substrate carrier family protein ucpB

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

    Range
    21898231..21901850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015765065.3 → XP_015620551.1  uncharacterized protein LOC4352409

    UniProtKB/TrEMBL
    B8BM98
    Conserved Domains (1) summary
    pfam00153
    Location:193 → 283
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials